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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs10109497 chr8:112980155 T/A KRT6C chr12:52862300-52867569:- 0.85 9.67 3.27E-13 Box Plot
ACC rs10109750 chr8:134445332 C/A PRHOXNB chr13:28552243-28562774:- 0.64 7.8 2.61E-10 Box Plot
ACC rs10110416 chr8:69180842 C/T PRHOXNB chr13:28552243-28562774:- 0.6 7.82 2.46E-10 Box Plot
ACC rs10111464 chr8:112917619 C/A KRT6C chr12:52862300-52867569:- 0.85 9.64 3.61E-13 Box Plot
ACC rs10146602 chr14:89693105 T/C PRAMEF16 chr1:13495254-13498260:+ 0.71 10.04 8.92E-14 Box Plot
ACC rs10178817 chr2:186876803 C/A AADACL4 chr1:12704566-12727097:+ 1.22 7.71 3.66E-10 Box Plot
ACC rs10179110 chr2:234002813 G/A PRHOXNB chr13:28552243-28562774:- 0.61 7.6 5.39E-10 Box Plot
ACC rs10184721 chr2:67814181 G/A PRHOXNB chr13:28552243-28562774:- 0.59 8.33 3.88E-11 Box Plot
ACC rs10199304 chr2:186876117 A/C AADACL4 chr1:12704566-12727097:+ 1.22 7.71 3.66E-10 Box Plot
ACC rs10204519 chr2:67786882 T/C PRHOXNB chr13:28552243-28562774:- 0.59 8.31 4.11E-11 Box Plot
ACC rs10222400 chr3:114878846 G/A PRAMEF16 chr1:13495254-13498260:+ 0.83 10.28 3.93E-14 Box Plot
ACC rs10227609 chr7:27547752 C/T PRHOXNB chr13:28552243-28562774:- 0.63 7.8 2.6E-10 Box Plot
ACC rs10227833 chr7:27547778 G/C PRHOXNB chr13:28552243-28562774:- 0.63 7.8 2.6E-10 Box Plot
ACC rs1031728 chr8:112959199 A/G KRT6C chr12:52862300-52867569:- 0.76 8.99 3.58E-12 Box Plot
ACC rs1040907 chr9:8120614 A/T GAS7 chr17:9813926-10101868:- -1 -8.62 1.37E-11 Box Plot